So I have a hole in both headers inside the merge. Thank God I bought Kooks(they have a lifetime warranty on craftsmanship and defects) and I didn't mess with trying to fix them. Now I have to file a claim and see if they will honor it.
I figure I'd update this post. I sent them off to kooks in April, they welded on new collectors with the little diamond piece. I was hoping they would of sent new headers out but this was better than nothing. Turn around time was less than 2 weeks.